Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb3Q91XZ7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb3Q91XZ7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb3Q91XZ7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm11425-201ENSMUST00000119608 498 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm11233-201ENSMUST00000122357 634 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm25843-201ENSMUST00000122582 314 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm6681-201ENSMUST00000205215 607 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Ermard-209ENSMUST00000226561 1019 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm9396-201ENSMUST00000076703 567 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb3Q91XZ7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms