Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb5Q91XZ5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdhb5Q91XZ5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb5Q91XZ5 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.27□□□□□ -0.12
Pcdhb5Q91XZ5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm8815-201ENSMUST00000173809 620 ntBASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm5706-201ENSMUST00000181525 993 ntBASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb5Q91XZ5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Gm15207-201ENSMUST00000119259 442 ntBASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Gm8365-201ENSMUST00000197334 648 ntBASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb5Q91XZ5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm13916-201ENSMUST00000117368 628 ntBASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm14585-201ENSMUST00000120713 634 ntBASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm9463-201ENSMUST00000206707 601 ntBASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm2553-201ENSMUST00000215986 605 ntBASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb5Q91XZ5 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Cog3-203ENSMUST00000227473 4197 ntBASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Gm14193-201ENSMUST00000105067 153 ntBASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Gm15782-201ENSMUST00000121073 445 ntBASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhb5Q91XZ5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms