Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gm8062-201ENSMUST00000139696 444 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gm9022-201ENSMUST00000182482 992 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Mir7085-201ENSMUST00000184353 66 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gm45880-201ENSMUST00000213041 853 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga3Q91XY5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm12314-201ENSMUST00000118104 538 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm17420-201ENSMUST00000164753 153 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm27023-201ENSMUST00000182372 285 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Gm24136-201ENSMUST00000083374 165 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms