Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm13315-201ENSMUST00000120376 991 ntBASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga4Q91XY4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm23270-201ENSMUST00000104055 131 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm25214-201ENSMUST00000104573 129 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm14109-201ENSMUST00000118814 309 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm13665-201ENSMUST00000120830 528 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm4857-201ENSMUST00000192718 785 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm10312-201ENSMUST00000078515 489 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga4Q91XY4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga4Q91XY4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga4Q91XY4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhga4Q91XY4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms