Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm26286-201ENSMUST00000104166 134 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12616-201ENSMUST00000118594 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm13045-201ENSMUST00000119019 712 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm24514-201ENSMUST00000174961 285 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12624-201ENSMUST00000177615 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12621-201ENSMUST00000177760 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12615-201ENSMUST00000177970 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12622-201ENSMUST00000177975 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12627-201ENSMUST00000178412 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12625-201ENSMUST00000179122 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12614-201ENSMUST00000179586 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm12613-201ENSMUST00000180323 382 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm8956-201ENSMUST00000203939 825 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx39aQ8VDW0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm12857-201ENSMUST00000117678 592 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm4482-201ENSMUST00000200876 742 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ddx39aQ8VDW0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.43□□□□□ -0.26
Ddx39aQ8VDW0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms