Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Gm24934-201ENSMUST00000103764 111 ntBASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm23200-201ENSMUST00000104379 132 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm25732-201ENSMUST00000175168 60 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm29615-201ENSMUST00000185371 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28224-201ENSMUST00000186078 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm29001-201ENSMUST00000186177 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28292-201ENSMUST00000186593 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28101-201ENSMUST00000187608 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm29076-201ENSMUST00000187689 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28302-201ENSMUST00000187931 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28646-201ENSMUST00000188220 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28205-201ENSMUST00000189177 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm29032-201ENSMUST00000189797 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm28695-201ENSMUST00000190300 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm37448-201ENSMUST00000192795 697 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Nsd1-205ENSMUST00000224693 852 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms