Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Rims2-204ENSMUST00000226410 3685 ntBASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc9Q8VC31 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc9Q8VC31 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm6714-201ENSMUST00000218677 2330 ntBASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc9Q8VC31 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm10766-202ENSMUST00000194123 606 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm43703-201ENSMUST00000200523 763 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm7775-201ENSMUST00000218871 853 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm43112-201ENSMUST00000196665 3122 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.57□□□□□ -0.08
Ccdc9Q8VC31 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms