Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps39Q8R5L3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps39Q8R5L3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Vps39Q8R5L3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm43433-201ENSMUST00000196573 481 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps39Q8R5L3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms