Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cchcr1Q8K2I2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cchcr1Q8K2I2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.33□□□□□ -0.11
Cchcr1Q8K2I2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm5187-201ENSMUST00000117317 991 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm14247-201ENSMUST00000120950 237 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm14832-201ENSMUST00000121289 322 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm5745-201ENSMUST00000183748 313 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cchcr1Q8K2I2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm5706-201ENSMUST00000181525 993 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm38002-201ENSMUST00000193255 180 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm38158-201ENSMUST00000194617 339 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm43433-201ENSMUST00000196573 481 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cchcr1Q8K2I2 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.31□□□□□ -0.12
Cchcr1Q8K2I2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms