Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rtn1Q8K0T0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn1Q8K0T0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm25668-201ENSMUST00000157700 129 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm25890-201ENSMUST00000177643 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm25700-201ENSMUST00000177693 110 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm22614-201ENSMUST00000178300 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm36943-201ENSMUST00000194422 282 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm22042-201ENSMUST00000082989 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm26110-201ENSMUST00000083971 165 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.02□□□□□ -0.17
Rtn1Q8K0T0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Gm32999-201ENSMUST00000192693 562 ntBASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn1Q8K0T0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms