Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm14109-201ENSMUST00000118814 309 ntBASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm13570-201ENSMUST00000140763 309 ntBASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm16505-201ENSMUST00000179981 232 ntBASIC12.41□□□□□ -0.42
CopaQ8CIE6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.41□□□□□ -0.42
CopaQ8CIE6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.41□□□□□ -0.42
CopaQ8CIE6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopaQ8CIE6 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.4□□□□□ -0.42
CopaQ8CIE6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Gm24990-201ENSMUST00000157406 323 ntBASIC12.4□□□□□ -0.42
CopaQ8CIE6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.4□□□□□ -0.42
CopaQ8CIE6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CopaQ8CIE6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms