Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm15547-201ENSMUST00000122152 333 ntBASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Cog3-203ENSMUST00000227473 4197 ntBASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup88Q8CEC0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm13665-201ENSMUST00000120830 528 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup88Q8CEC0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.31□□□□□ -0.12
Nup88Q8CEC0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms