Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.35□□□□□ -0.27
Trim9Q8C7M3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.35□□□□□ -0.27
Trim9Q8C7M3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim9Q8C7M3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm37259-201ENSMUST00000193903 849 ntBASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim9Q8C7M3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim9Q8C7M3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim9Q8C7M3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim9Q8C7M3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.33□□□□□ -0.27
Trim9Q8C7M3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim9Q8C7M3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms