Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm25545-201ENSMUST00000122673 323 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm43186-201ENSMUST00000198130 824 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col6a6Q8C6K9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm3150-201ENSMUST00000166418 204 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm12407-201ENSMUST00000180219 324 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm7902-201ENSMUST00000198842 947 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a6Q8C6K9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm12579-201ENSMUST00000118040 783 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm16071-201ENSMUST00000119589 793 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm17826-201ENSMUST00000189720 798 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm5298-201ENSMUST00000201122 892 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms