Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Mir877-201ENSMUST00000104738 85 ntBASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Gm45433-201ENSMUST00000209386 247 ntBASIC14.15□□□□□ -0.14
Usp44Q8C2S0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Usp44Q8C2S0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Usp44Q8C2S0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Gm9257-201ENSMUST00000221254 232 ntBASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp44Q8C2S0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Gm24749-201ENSMUST00000157838 343 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.13□□□□□ -0.15
Usp44Q8C2S0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms