Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm13492-201ENSMUST00000119772 665 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm7029-201ENSMUST00000173226 450 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps9d1Q8C190 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm15198-201ENSMUST00000117283 177 ntBASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm27682-201ENSMUST00000183930 110 ntBASIC11.35□□□□□ -0.59
Vps9d1Q8C190 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps9d1Q8C190 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms