Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm14270-201ENSMUST00000118388 846 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm9673-201ENSMUST00000119287 781 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm12943-201ENSMUST00000119616 210 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm12453-201ENSMUST00000121981 331 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm44647-201ENSMUST00000207402 428 ntBASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col16a1Q8BLX7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm14213-201ENSMUST00000119778 768 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm6390-201ENSMUST00000215034 589 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 CT009527.1-201ENSMUST00000224205 339 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Gm8894-201ENSMUST00000074642 666 ntBASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col16a1Q8BLX7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm17070-201ENSMUST00000170463 784 ntBASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm21778-201ENSMUST00000178779 471 ntBASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm43163-201ENSMUST00000196571 442 ntBASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 AC154361.2-201ENSMUST00000224747 943 ntBASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col16a1Q8BLX7 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Gm12274-201ENSMUST00000120062 385 ntBASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms