Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Gm42937-201ENSMUST00000197360 752 ntBASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdhr3Q8BL00 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gm23912-201ENSMUST00000104687 87 ntBASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdhr3Q8BL00 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdhr3Q8BL00 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdhr3Q8BL00 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdhr3Q8BL00 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms