Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm3890-201ENSMUST00000182416 207 ntBASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.73□□□□□ -0.53
Rnf38Q8BI21 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf38Q8BI21 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm13342-201ENSMUST00000121055 207 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm45925-201ENSMUST00000218882 744 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gm45930-201ENSMUST00000221330 292 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf38Q8BI21 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms