Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm23949-201ENSMUST00000104027 127 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm14208-201ENSMUST00000119645 678 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm2260-201ENSMUST00000184965 657 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm18056-201ENSMUST00000207670 568 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm18061-201ENSMUST00000208350 562 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm18063-201ENSMUST00000208529 568 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm18052-201ENSMUST00000208750 559 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.28□□□□□ -0.6
Atg4dQ8BGV9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.27□□□□□ -0.6
Atg4dQ8BGV9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm270-201ENSMUST00000223010 976 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Matn2-203ENSMUST00000226766 3252 ntBASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4dQ8BGV9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4dQ8BGV9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms