Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim6Q8BGE7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim6Q8BGE7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim6Q8BGE7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.9□□□□□ -0.35
Trim6Q8BGE7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim6Q8BGE7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm27243-201ENSMUST00000183964 521 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim6Q8BGE7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms