Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gm807-202ENSMUST00000224929 408 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gm26448-201ENSMUST00000082446 203 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.61□□□□□ -0.55
Vrk1Q80X41 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Vrk1Q80X41 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm7851-201ENSMUST00000117574 323 ntBASIC11.6□□□□□ -0.55
Vrk1Q80X41 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm14760-201ENSMUST00000121831 999 ntBASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.6□□□□□ -0.55
Vrk1Q80X41 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.6□□□□□ -0.55
Vrk1Q80X41 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Vrk1Q80X41 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms