Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 B9d1os-201ENSMUST00000137010 674 ntBASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm18734-201ENSMUST00000172937 808 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm27552-201ENSMUST00000183351 62 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm27844-201ENSMUST00000183613 62 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm4034-201ENSMUST00000187674 480 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gm18515-201ENSMUST00000219755 797 ntBASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh19Q80TF3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm7722-201ENSMUST00000120646 741 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms