Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm13492-201ENSMUST00000119772 665 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm11941-201ENSMUST00000119904 610 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm25043-201ENSMUST00000158604 212 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm43084-201ENSMUST00000200696 947 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf38bQ80SY5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm12165-201ENSMUST00000117047 342 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm13875-201ENSMUST00000120162 282 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm21156-201ENSMUST00000189693 869 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm37666-201ENSMUST00000194110 866 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm45224-201ENSMUST00000208203 414 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf38bQ80SY5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms