Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pif1Q80SX8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm11989-201ENSMUST00000117240 672 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm11362-201ENSMUST00000118838 850 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm13408-201ENSMUST00000119822 798 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm15432-201ENSMUST00000121106 195 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm13935-201ENSMUST00000121859 798 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm9022-201ENSMUST00000182482 992 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Ntng1-201ENSMUST00000051253 327 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.3□□□□□ -0.6
Pif1Q80SX8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Pif1Q80SX8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pif1Q80SX8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm22133-201ENSMUST00000102082 109 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm45770-201ENSMUST00000212105 616 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms