Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm8342-201ENSMUST00000209839 757 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx55Q6ZPL9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm13047-201ENSMUST00000117116 815 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm11801-201ENSMUST00000117807 746 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Gm23680-201ENSMUST00000083162 164 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Olfr584-201ENSMUST00000098210 964 ntBASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ddx55Q6ZPL9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm25063-201ENSMUST00000104666 94 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm5451-201ENSMUST00000080545 579 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx55Q6ZPL9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx55Q6ZPL9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx55Q6ZPL9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx55Q6ZPL9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms