Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rad54bQ6PFE3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rad54bQ6PFE3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rad54bQ6PFE3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms