Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm25766-201ENSMUST00000104101 131 ntBASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm38314-201ENSMUST00000195709 625 ntBASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm43852-201ENSMUST00000202098 917 ntBASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd4Q6PDQ2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm12628-201ENSMUST00000122193 382 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm15549-201ENSMUST00000121595 622 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm16397-201ENSMUST00000122201 494 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Gm8197-202ENSMUST00000193422 934 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chd4Q6PDQ2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.52■□□□□ 0.08
Chd4Q6PDQ2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm24398-201ENSMUST00000157870 109 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm37826-201ENSMUST00000195329 322 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm3726-201ENSMUST00000203110 785 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gm39288-201ENSMUST00000210554 446 ntBASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd4Q6PDQ2 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms