Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.17□□□□□ -0.62
AtmQ62388 Gm37826-201ENSMUST00000195329 322 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Gm7940-201ENSMUST00000218195 769 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Gm9791-201ENSMUST00000060997 447 ntBASIC11.17□□□□□ -0.62
AtmQ62388 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.17□□□□□ -0.62
AtmQ62388 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
AtmQ62388 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm9673-201ENSMUST00000119287 781 ntBASIC11.17□□□□□ -0.62
AtmQ62388 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm18711-201ENSMUST00000199341 750 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Gm5650-201ENSMUST00000209641 598 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Gm6331-201ENSMUST00000217890 450 ntBASIC11.17□□□□□ -0.62
AtmQ62388 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.17□□□□□ -0.62
AtmQ62388 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
AtmQ62388 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.17□□□□□ -0.62
AtmQ62388 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Gm6108-201ENSMUST00000208365 367 ntBASIC11.17□□□□□ -0.62
AtmQ62388 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.17□□□□□ -0.62
AtmQ62388 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.17□□□□□ -0.62
AtmQ62388 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AtmQ62388 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.17□□□□□ -0.62
AtmQ62388 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
AtmQ62388 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
AtmQ62388 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.16□□□□□ -0.62
AtmQ62388 Gm44216-201ENSMUST00000203942 157 ntBASIC11.16□□□□□ -0.62
AtmQ62388 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Erich3-203ENSMUST00000189969 3460 ntBASIC11.16□□□□□ -0.62
AtmQ62388 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.16□□□□□ -0.62
AtmQ62388 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Gm43380-201ENSMUST00000200421 220 ntBASIC11.16□□□□□ -0.62
AtmQ62388 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AtmQ62388 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.16□□□□□ -0.62
AtmQ62388 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AtmQ62388 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
AtmQ62388 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.15□□□□□ -0.62
AtmQ62388 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms