Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VcanQ62059 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Gm14395-201ENSMUST00000120494 563 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Mir1941-201ENSMUST00000157834 83 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.05□□□□□ -0.64
VcanQ62059 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VcanQ62059 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VcanQ62059 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
VcanQ62059 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VcanQ62059 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VcanQ62059 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Gm15615-201ENSMUST00000118876 198 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.05□□□□□ -0.64
VcanQ62059 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Gm43866-201ENSMUST00000203894 839 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.05□□□□□ -0.64
VcanQ62059 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VcanQ62059 Olfr584-201ENSMUST00000098210 964 ntBASIC11.05□□□□□ -0.64
VcanQ62059 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
VcanQ62059 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VcanQ62059 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 Gm2566-201ENSMUST00000201267 431 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VcanQ62059 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VcanQ62059 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Gm8226-201ENSMUST00000190511 798 ntBASIC11.04□□□□□ -0.64
VcanQ62059 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.04□□□□□ -0.64
VcanQ62059 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.04□□□□□ -0.64
VcanQ62059 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.04□□□□□ -0.64
VcanQ62059 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VcanQ62059 Gm4978-201ENSMUST00000071565 801 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VcanQ62059 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
VcanQ62059 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.04□□□□□ -0.64
VcanQ62059 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VcanQ62059 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.04□□□□□ -0.64
VcanQ62059 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.03□□□□□ -0.64
VcanQ62059 Gm15207-201ENSMUST00000119259 442 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms