Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Gm6108-201ENSMUST00000208365 367 ntBASIC11.84□□□□□ -0.51
Cacna1eQ61290 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.84□□□□□ -0.51
Cacna1eQ61290 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.84□□□□□ -0.51
Cacna1eQ61290 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1eQ61290 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Cacna1eQ61290 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cacna1eQ61290 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm9192-201ENSMUST00000183221 985 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm17877-201ENSMUST00000192578 814 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm9136-201ENSMUST00000193368 454 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm25076-201ENSMUST00000104098 132 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm26013-201ENSMUST00000104404 119 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm10807-201ENSMUST00000177134 795 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 Gm5100-201ENSMUST00000195631 589 ntBASIC11.83□□□□□ -0.52
Cacna1eQ61290 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1eQ61290 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.82□□□□□ -0.52
Cacna1eQ61290 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.82□□□□□ -0.52
Cacna1eQ61290 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.82□□□□□ -0.52
Cacna1eQ61290 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1eQ61290 Gm15004-201ENSMUST00000119192 630 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms