Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Gm9211-201ENSMUST00000182882 975 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Gm29787-201ENSMUST00000222129 849 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Shroom1Q5SX79 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm9550-201ENSMUST00000161130 862 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm17827-201ENSMUST00000211825 742 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shroom1Q5SX79 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Shroom1Q5SX79 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shroom1Q5SX79 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Shroom1Q5SX79 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm13035-201ENSMUST00000117496 342 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm15515-201ENSMUST00000117827 822 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm13045-201ENSMUST00000119019 712 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Mir1943-201ENSMUST00000158276 73 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm9630-201ENSMUST00000178304 885 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms