Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Rgr-203ENSMUST00000225070 4704 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Rims2-204ENSMUST00000226410 3685 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm4875-201ENSMUST00000118257 786 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm11439-201ENSMUST00000118598 409 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm7775-201ENSMUST00000218871 853 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm9063-201ENSMUST00000223299 582 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms