Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm37489-201ENSMUST00000191883 159 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm44958-201ENSMUST00000203734 736 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm18935-201ENSMUST00000212692 664 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gm45925-201ENSMUST00000218882 744 ntBASIC11.98□□□□□ -0.49
Scn2bQ56A07 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn2bQ56A07 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm24548-201ENSMUST00000158650 108 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Mospd4-201ENSMUST00000180618 576 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Gm10076-201ENSMUST00000073238 384 ntBASIC11.97□□□□□ -0.49
Scn2bQ56A07 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn2bQ56A07 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms