Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.2□□□□□ -0.46
Usp30Q3UN04 Gm45770-201ENSMUST00000212105 616 ntBASIC12.2□□□□□ -0.46
Usp30Q3UN04 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.2□□□□□ -0.46
Usp30Q3UN04 Ginm1-202ENSMUST00000065124 300 ntBASIC12.2□□□□□ -0.46
Usp30Q3UN04 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp30Q3UN04 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm5419-201ENSMUST00000119301 527 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm11660-201ENSMUST00000120955 412 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm8199-201ENSMUST00000121323 823 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm10051-201ENSMUST00000145209 414 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm4034-201ENSMUST00000187674 480 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm37246-201ENSMUST00000192665 835 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.19□□□□□ -0.46
Usp30Q3UN04 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Usp30Q3UN04 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.18□□□□□ -0.46
Usp30Q3UN04 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.18□□□□□ -0.46
Usp30Q3UN04 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp30Q3UN04 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms