Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upf3aQ3ULJ3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upf3aQ3ULJ3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3aQ3ULJ3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3aQ3ULJ3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3aQ3ULJ3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upf3aQ3ULJ3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms