Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Treml4Q3LRV9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm11667-201ENSMUST00000119828 486 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm7593-201ENSMUST00000187246 644 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm8285-201ENSMUST00000208293 759 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm7600-201ENSMUST00000209657 785 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Gm270-201ENSMUST00000223010 976 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Treml4Q3LRV9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Treml4Q3LRV9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.45□□□□□ -0.58
Treml4Q3LRV9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Treml4Q3LRV9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms