Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm12030-201ENSMUST00000121917 223 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm38151-201ENSMUST00000195085 289 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm5298-201ENSMUST00000201122 892 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm35713-201ENSMUST00000210516 199 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Olfr584-201ENSMUST00000098210 964 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrna5Q2MKA5 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.33□□□□□ -0.11
Chrna5Q2MKA5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.33□□□□□ -0.11
Chrna5Q2MKA5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna5Q2MKA5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chrna5Q2MKA5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm4034-201ENSMUST00000187674 480 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm8325-201ENSMUST00000099086 453 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Chrna5Q2MKA5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chrna5Q2MKA5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrna5Q2MKA5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms