Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm12490-201ENSMUST00000120255 560 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Proscos-202ENSMUST00000178990 666 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm28693-202ENSMUST00000190758 331 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rab42Q0PD08 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.76□□□□□ -0.69
Rab42Q0PD08 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rab42Q0PD08 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm8598-201ENSMUST00000221184 836 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rab42Q0PD08 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.75□□□□□ -0.69
Rab42Q0PD08 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rab42Q0PD08 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms