Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx4Q07424 Daam2-202ENSMUST00000224595 1926 ntBASIC9.41□□□□□ -0.9
Cdx4Q07424 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx4Q07424 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm24255-201ENSMUST00000104481 128 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm15808-201ENSMUST00000119046 604 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm16296-201ENSMUST00000159905 325 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm8018-201ENSMUST00000173536 789 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm38092-201ENSMUST00000195600 653 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm6082-201ENSMUST00000215204 454 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.4□□□□□ -0.9
Cdx4Q07424 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cdx4Q07424 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx4Q07424 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Cdx4Q07424 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.4□□□□□ -0.91
Cdx4Q07424 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.4□□□□□ -0.91
Cdx4Q07424 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx4Q07424 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx4Q07424 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.4□□□□□ -0.91
Cdx4Q07424 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
Cdx4Q07424 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms