Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.21□□□□□ -0.45
Pfdn6Q03958 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm28882-201ENSMUST00000185504 314 ntBASIC12.21□□□□□ -0.45
Pfdn6Q03958 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm19309-201ENSMUST00000218295 205 ntBASIC12.21□□□□□ -0.45
Pfdn6Q03958 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.21□□□□□ -0.45
Pfdn6Q03958 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn6Q03958 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.21□□□□□ -0.46
Pfdn6Q03958 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn6Q03958 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm12957-201ENSMUST00000117835 377 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm14127-201ENSMUST00000117906 678 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm26956-201ENSMUST00000182176 986 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.2□□□□□ -0.46
Pfdn6Q03958 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Pfdn6Q03958 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.19□□□□□ -0.46
Pfdn6Q03958 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm8062-201ENSMUST00000139696 444 ntBASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.19□□□□□ -0.46
Pfdn6Q03958 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Gm6013-201ENSMUST00000212264 699 ntBASIC12.19□□□□□ -0.46
Pfdn6Q03958 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pfdn6Q03958 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms