Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Scn1bP97952 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.07□□□□□ -0.64
Scn1bP97952 Gm37917-201ENSMUST00000194711 392 ntBASIC11.07□□□□□ -0.64
Scn1bP97952 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.07□□□□□ -0.64
Scn1bP97952 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.07□□□□□ -0.64
Scn1bP97952 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.07□□□□□ -0.64
Scn1bP97952 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.07□□□□□ -0.64
Scn1bP97952 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Scn1bP97952 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm12859-201ENSMUST00000117834 427 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Gm12384-201ENSMUST00000119228 919 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Scn1bP97952 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.06□□□□□ -0.64
Scn1bP97952 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scn1bP97952 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.05□□□□□ -0.64
Scn1bP97952 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.05□□□□□ -0.64
Scn1bP97952 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Scn1bP97952 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
Scn1bP97952 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.05□□□□□ -0.64
Scn1bP97952 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms