Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm9358-201ENSMUST00000183067 927 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm43058-201ENSMUST00000197645 625 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm43275-201ENSMUST00000202053 1020 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm11783-201ENSMUST00000119549 885 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm7940-201ENSMUST00000218195 769 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.15■□□□□ 0.02
Nkx2-3P97334 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-3P97334 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm17213-201ENSMUST00000165161 1360 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm25072-201ENSMUST00000175233 235 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm28937-201ENSMUST00000185413 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm29400-201ENSMUST00000187208 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm8531-201ENSMUST00000188319 893 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm28662-201ENSMUST00000188446 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm28251-201ENSMUST00000188835 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm37318-201ENSMUST00000194325 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm38017-201ENSMUST00000194768 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm37287-201ENSMUST00000195449 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm37793-201ENSMUST00000195548 695 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 AC132446.1-201ENSMUST00000222655 226 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.14■□□□□ 0.01
Nkx2-3P97334 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms