Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm19046-201ENSMUST00000221263 1298 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
PrkdcP97313 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
PrkdcP97313 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm28937-201ENSMUST00000185413 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm29400-201ENSMUST00000187208 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm28662-201ENSMUST00000188446 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm28251-201ENSMUST00000188835 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm37318-201ENSMUST00000194325 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm38017-201ENSMUST00000194768 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm37287-201ENSMUST00000195449 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gm37793-201ENSMUST00000195548 695 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC7.96□□□□□ -1.13
PrkdcP97313 AC154407.1-201ENSMUST00000226777 526 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm5292-201ENSMUST00000073317 580 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Krtap6-3-201ENSMUST00000079151 444 ntBASIC7.96□□□□□ -1.13
PrkdcP97313 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
PrkdcP97313 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PrkdcP97313 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm38192-201ENSMUST00000194364 1847 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm15636-201ENSMUST00000119205 668 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm42908-201ENSMUST00000197508 870 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 AC129217.1-201ENSMUST00000225181 642 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
PrkdcP97313 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC7.96□□□□□ -1.14
PrkdcP97313 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm5071-201ENSMUST00000104922 1035 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC7.96□□□□□ -1.14
PrkdcP97313 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PrkdcP97313 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Kcnk16-202ENSMUST00000225596 2127 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 AC154589.2-201ENSMUST00000228847 251 ntBASIC7.96□□□□□ -1.14
PrkdcP97313 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PrkdcP97313 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PrkdcP97313 Rab3c-202ENSMUST00000223922 2398 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm23694-201ENSMUST00000179335 110 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm27149-201ENSMUST00000184716 1266 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Gm27316-201ENSMUST00000184884 277 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PrkdcP97313 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
PrkdcP97313 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PrkdcP97313 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm14639-201ENSMUST00000120850 866 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Gm25580-201ENSMUST00000083409 327 ntBASIC7.95□□□□□ -1.14
PrkdcP97313 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PrkdcP97313 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PrkdcP97313 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms