Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm13316-201ENSMUST00000140537 691 ntBASIC13.38□□□□□ -0.27
Hmgb1P63158 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm37008-201ENSMUST00000195712 319 ntBASIC13.38□□□□□ -0.27
Hmgb1P63158 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.38□□□□□ -0.27
Hmgb1P63158 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.38□□□□□ -0.27
Hmgb1P63158 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.38□□□□□ -0.27
Hmgb1P63158 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.38□□□□□ -0.27
Hmgb1P63158 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgb1P63158 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm6023-201ENSMUST00000118217 606 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm18711-201ENSMUST00000199341 750 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 AC121870.2-201ENSMUST00000214343 1870 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.37□□□□□ -0.27
Hmgb1P63158 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgb1P63158 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgb1P63158 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.36□□□□□ -0.27
Hmgb1P63158 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Hmgb1P63158 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmgb1P63158 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hmgb1P63158 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Hmgb1P63158 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Gm13829-201ENSMUST00000119600 138 ntBASIC13.36□□□□□ -0.27
Hmgb1P63158 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgb1P63158 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.36□□□□□ -0.27
Hmgb1P63158 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms