Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.42□□□□□ -0.42
Ybx1P62960 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Gm11511-201ENSMUST00000118146 540 ntBASIC12.42□□□□□ -0.42
Ybx1P62960 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.42□□□□□ -0.42
Ybx1P62960 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ybx1P62960 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Gm45219-201ENSMUST00000205602 465 ntBASIC12.42□□□□□ -0.42
Ybx1P62960 Gm9132-201ENSMUST00000210182 832 ntBASIC12.42□□□□□ -0.42
Ybx1P62960 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.42□□□□□ -0.42
Ybx1P62960 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.42□□□□□ -0.42
Ybx1P62960 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ybx1P62960 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ybx1P62960 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ybx1P62960 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm15595-201ENSMUST00000120840 961 ntBASIC12.41□□□□□ -0.42
Ybx1P62960 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm4726-201ENSMUST00000135604 736 ntBASIC12.41□□□□□ -0.42
Ybx1P62960 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm6019-201ENSMUST00000148369 736 ntBASIC12.41□□□□□ -0.42
Ybx1P62960 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm9463-201ENSMUST00000206707 601 ntBASIC12.41□□□□□ -0.42
Ybx1P62960 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.41□□□□□ -0.42
Ybx1P62960 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.41□□□□□ -0.42
Ybx1P62960 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ybx1P62960 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ybx1P62960 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ybx1P62960 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ybx1P62960 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ybx1P62960 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ybx1P62960 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms