Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.51□□□□□ -0.25
Tpm1P58771 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tpm1P58771 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Gm11803-201ENSMUST00000119966 444 ntBASIC13.51□□□□□ -0.25
Tpm1P58771 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.51□□□□□ -0.25
Tpm1P58771 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Tpm1P58771 Gm9022-201ENSMUST00000182482 992 ntBASIC13.51□□□□□ -0.25
Tpm1P58771 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tpm1P58771 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tpm1P58771 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.51□□□□□ -0.25
Tpm1P58771 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tpm1P58771 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm1P58771 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Tpm1P58771 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm27437-201ENSMUST00000183429 107 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 Gm27243-201ENSMUST00000183964 521 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.5□□□□□ -0.25
Tpm1P58771 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm1P58771 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.49□□□□□ -0.25
Tpm1P58771 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm1P58771 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.49□□□□□ -0.25
Tpm1P58771 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm1P58771 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.49□□□□□ -0.25
Tpm1P58771 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Tpm1P58771 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm12091-201ENSMUST00000146791 830 ntBASIC13.49□□□□□ -0.25
Tpm1P58771 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.49□□□□□ -0.25
Tpm1P58771 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Tpm1P58771 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm1P58771 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm1P58771 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.49□□□□□ -0.25
Tpm1P58771 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms