Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CtskP55097 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CtskP55097 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CtskP55097 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.99□□□□□ -0.49
CtskP55097 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CtskP55097 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CtskP55097 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CtskP55097 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CtskP55097 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.98□□□□□ -0.49
CtskP55097 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.98□□□□□ -0.49
CtskP55097 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.98□□□□□ -0.49
CtskP55097 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.98□□□□□ -0.49
CtskP55097 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Gm14644-201ENSMUST00000116671 647 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm11331-201ENSMUST00000119764 288 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.98□□□□□ -0.49
CtskP55097 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm27552-201ENSMUST00000183351 62 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm27844-201ENSMUST00000183613 62 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm5244-202ENSMUST00000189517 743 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm37666-201ENSMUST00000194110 866 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm17812-201ENSMUST00000204935 318 ntBASIC11.98□□□□□ -0.49
CtskP55097 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Gm35638-201ENSMUST00000220724 652 ntBASIC11.98□□□□□ -0.49
CtskP55097 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.98□□□□□ -0.49
CtskP55097 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CtskP55097 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.98□□□□□ -0.49
CtskP55097 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CtskP55097 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.97□□□□□ -0.49
CtskP55097 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.97□□□□□ -0.49
CtskP55097 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.97□□□□□ -0.49
CtskP55097 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.97□□□□□ -0.49
CtskP55097 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.97□□□□□ -0.49
CtskP55097 Gm17040-202ENSMUST00000170597 889 ntBASIC11.97□□□□□ -0.49
CtskP55097 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.97□□□□□ -0.49
CtskP55097 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Gm18730-201ENSMUST00000218038 343 ntBASIC11.97□□□□□ -0.49
CtskP55097 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.97□□□□□ -0.49
CtskP55097 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.97□□□□□ -0.49
CtskP55097 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CtskP55097 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CtskP55097 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
CtskP55097 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms