Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.13□□□□□ -0.47
Fdft1P53798 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm27572-201ENSMUST00000183702 255 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm44958-201ENSMUST00000203734 736 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 Gm44882-201ENSMUST00000205702 802 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm9823-201ENSMUST00000051212 327 ntBASIC12.13□□□□□ -0.47
Fdft1P53798 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fdft1P53798 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fdft1P53798 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Fdft1P53798 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fdft1P53798 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm12742-201ENSMUST00000117326 410 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Mospd4-201ENSMUST00000180618 576 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.12□□□□□ -0.47
Fdft1P53798 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.12□□□□□ -0.47
Fdft1P53798 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms