Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Sox3P53784 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sox3P53784 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox3P53784 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox3P53784 Gm12058-201ENSMUST00000118614 437 ntBASIC11.66□□□□□ -0.54
Sox3P53784 Gm11978-201ENSMUST00000122315 466 ntBASIC11.66□□□□□ -0.54
Sox3P53784 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox3P53784 Gm22121-201ENSMUST00000175148 54 ntBASIC11.66□□□□□ -0.54
Sox3P53784 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Gm37666-201ENSMUST00000194110 866 ntBASIC11.66□□□□□ -0.54
Sox3P53784 Rprl1-202ENSMUST00000198476 238 ntBASIC11.66□□□□□ -0.54
Sox3P53784 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.66□□□□□ -0.54
Sox3P53784 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox3P53784 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox3P53784 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox3P53784 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sox3P53784 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.65□□□□□ -0.54
Sox3P53784 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.65□□□□□ -0.54
Sox3P53784 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.65□□□□□ -0.54
Sox3P53784 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.65□□□□□ -0.54
Sox3P53784 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm8365-201ENSMUST00000197334 648 ntBASIC11.65□□□□□ -0.54
Sox3P53784 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox3P53784 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox3P53784 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox3P53784 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.65□□□□□ -0.54
Sox3P53784 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox3P53784 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox3P53784 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.65□□□□□ -0.54
Sox3P53784 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.65□□□□□ -0.55
Sox3P53784 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.65□□□□□ -0.55
Sox3P53784 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox3P53784 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.65□□□□□ -0.55
Sox3P53784 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sox3P53784 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.65□□□□□ -0.55
Sox3P53784 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox3P53784 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox3P53784 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.65□□□□□ -0.55
Sox3P53784 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms